By default, this compares a model's model file on disk to the model file of
its "parent" model (the model referenced in its based_on field). It can
optionally take a second model (passed to .mod2), in which case it
will compare the first model to the second model, ignoring the based_on
field entirely.
model_diff(.mod, .mod2 = NULL, .file = "model", ..., .viewer = FALSE)
# S3 method for bbi_nonmem_model
model_diff(.mod, .mod2 = NULL, .file = c("model"), ..., .viewer = FALSE)
# S3 method for bbi_nmboot_model
model_diff(.mod, .mod2 = NULL, .file = c("model"), ..., .viewer = FALSE)
# S3 method for bbi_nmsim_model
model_diff(.mod, .mod2 = NULL, .file = c("model"), ..., .viewer = FALSE)The bbi_{.model_type}_model to compare.
If a bbi_{.model_type}_model object is passed, compare .mod to
.mod2. If .mod2 = NULL, the default, compare .mod to the model at
get_based_on(.mod). See "based_on details" in Details section.
Defaults to "model" which compares the default model file for
that model type. For NONMEM models, the control stream is compared. Other
model types may accept additional values and support comparing multiple
files. See ".file argument" of the specific S3 method for details.
arguments passed through to methods. (Currently none.)
If FALSE, the default, prints diff to console or renders in
Rmd. If TRUE, render the diff in the Viewer window. Note: this option
will hold the console with Press ENTER to continue... so it is only
recommended for interactive use.
Returns a "Diff" object from the diffobj package that renders
when printed or called in the console.
Printing vs. knitting: When using this function in an .Rmd file that
you intend to knit to HTML, be sure to set the chunk option results = "asis" for the relevant chunk. If you do this, the model_diff() output
will render nicely in color in the HTML doc. Note this only works for HTML
output. If you are are rendering to a different format (PDF, DOCX, etc.)
you can still use model_diff() without results = "asis" and it will
render, although it won't look particularly nice.
based_on details: As described above, if .mod2 is NULL (the default),
then the .mod will be compared to the model returned by get_based_on(.mod).
However, if there is more than one model (or no models) in .mod$based_on, then user
will be prompted to explicitly pass the model they want to compare against to
the .mod2 argument.