Reads in a whitespace-delimited NONMEM output file (for example .grd or .ext
or a table output) or a NONMEM input data file. Will print the number of rows
and columns when the file is loaded. This printing can be suppressed by
setting options(bbr.verbose = FALSE).
nm_file(.mod, .suffix = NULL, ...)
nm_grd(.mod, .rename = TRUE)
nm_tab(.mod)
nm_par_tab(.mod)
nm_data(.mod)Either a bbi_nonmem_model, bbi_nonmem_summary, or a path to a
file to read in. If passing model object to nm_file(), must also pass .suffix that
will be passed through to build_path_from_model().
Character vector to append the end of the absolute model path.
Will be appended as is so, if passing a file extension, be sure to included the leading ".".
See examples.
arguments passed through to methods. (Currently none.)
If TRUE, the default, will rename .grd columns to the
relevant parameter names. Otherwise will leave column names as is.
A tibble with the data from the specified file and estimation method.
nm_file() is called internally by the family of functions in this help doc,
as well as by nm_tables() and nm_join().
nm_file() assumes there is only one table per file and therefore
nm_file() (and family) are not compatible with files that have multiple
tables, for example an .ext file for a model with multiple estimation
methods or a table file from a model using $SIM. For these kinds of files,
consider using data.table::fread() with the skip and nrows arguments.
nm_grd(): Reads .grd file from a bbi_nonmem_model or
bbi_nonmem_summary object
nm_tab(): Reads {get_model_id(.mod)}.tab file from a
bbi_nonmem_model or bbi_nonmem_summary object
nm_par_tab(): Reads {get_model_id(.mod)}par.tab file from a
bbi_nonmem_model or bbi_nonmem_summary object
nm_data(): Reads the input data file from a bbi_nonmem_model or
bbi_nonmem_summary object