Reads in a whitespace-delimited NONMEM output file (for example .grd or .ext
or a table output) or a NONMEM input data file. Will print the number of rows
and columns when the file is loaded. This printing can be suppressed by
setting options(bbr.verbose = FALSE).
nm_file(.mod, .suffix = NULL, ...)
nm_grd(.mod, .rename = TRUE)
nm_tab(.mod)
nm_par_tab(.mod)
nm_data(.mod, filter = FALSE)Either a bbi_nonmem_model, bbi_nonmem_summary, or a path to a
file to read in. If passing model object to nm_file(), must also pass .suffix that
will be passed through to build_path_from_model().
Character vector to append the end of the absolute model path.
Will be appended as is so, if passing a file extension, be sure to included the leading ".".
See examples.
arguments passed through to methods. (Currently none.)
Logical (T/F). If TRUE, the default, will rename .grd
columns to the relevant parameter names. Otherwise will leave column names
as is.
Logical (T/F). If TRUE, filter data based on IGNORE LIST
or ACCEPT LIST options defined in the $DATA record.
A tibble with the data from the specified file and estimation method.
nm_file() is called internally by the family of functions in this help doc,
as well as by nm_tables() and nm_join().
nm_file() assumes there is only one table per file and therefore
nm_file() (and family) are not compatible with files that have multiple
tables, for example an .ext file for a model with multiple estimation
methods or a table file from a model using $SIM. For these kinds of files,
consider using nm_file_multi_tab.
nm_grd(): Reads .grd file from a bbi_nonmem_model or
bbi_nonmem_summary object
nm_tab(): Reads {get_model_id(.mod)}.tab file from a
bbi_nonmem_model or bbi_nonmem_summary object
nm_par_tab(): Reads {get_model_id(.mod)}par.tab file from a
bbi_nonmem_model or bbi_nonmem_summary object
nm_data(): Reads the input data file from a bbi_nonmem_model or
bbi_nonmem_summary object