This is an internal column definition data base that can be used for lookup without referencing a lookup file in the header.
This file is located in
inst/internal/ysdb_internal.yml.
CONTENTS
SETUP__:
description: yspec internal column database
C:
short: comment character
values: [".", "C"]
decode: [analysis row, commented row]
type: character
ID:
short: subject identifier
type: numeric
USUBJID:
short: unique subject identifier
type: character
SUBJ:
short: subject identifier
type: character
STUDYID:
short: study identifier
type: character
CMT:
short: compartment number
type: numeric
EVID:
short: event ID
values: {observation: 0, dose: 1}
AMT:
short: dose amount
type: numeric
RATE:
short: infusion rate
type: numeric
II:
short: inter-dose interval
type: numeric
SS:
short: steady state indicator
values: [0,1]
decode:
- non-steady state indicator
- steady state indicator
MDV:
values: {non-missing: 0, missing: 1}
type: numeric
long: missing DV indicator
comment: per NONMEM specifications
DV:
short: dependent variable
type: numeric
WT:
short: weight
unit: kg
type: numeric
EGFR:
short: eGFR
long: estimated glomerular filtration rate
unit: ml/min/1.73m2
BMI:
long: body mass index
unit: m2/kg
type: numeric
HT:
about: [height, cm]
long: Height
type: numeric
ALB:
long: serum albumin
unit: g/dL
short: albumin
type: numeric
AGE:
about: [age,years]
type: numeric
SEX:
values: {male: 0, female: 1}
NUM:
short: record number
type: numeric
BQL:
short: "data point below the LOQ"
type: numeric
values: {0: not below quantitation limit, 1: below quantitation limit}
LOQ:
short: assay limit of quantification
type: numeric