Acknowledgements

Institutions

We thank Metrum Research Group, Columbia University, and AstraZeneca.

Funding

This work was funded in part by the following organizations:

Office of Naval Research (ONR) contract N00014-16-P-2039

provided as part of the Small Business Technology Transfer (STTR) program. The content of the information presented in this document does not necessarily reflect the position or policy of the Government and no official endorsement should be inferred.

Bill & Melinda Gates Foundation.

Individuals

We thank the Stan Development Team for giving us guidance on how to create new Stan functions and adding features to Stan’s core language that facilitate building ODE-based models.

We also thank Kyle Baron and Hunter Ford for helpful advice on coding in C++ and using GitHub, Curtis Johnston for reviewing the User Manual, and Yaming Su for using Torsten and giving us feedback.